All pastes #565573 Raw Edit

Something

public text v1 · immutable
·published 2007-06-14 01:26 UTC
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<rdf:RDF
    xmlns="urn:lsid:brc-central.org:epitope:"
    xmlns:gff="http://song.sourceforge.net/owl/gff3#"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:brc="http://brc-central.org/owl/"
    xmlns:epi="http://www.immuneepitope.org/Resources/Ontology/"
    xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
    xmlns:pathema="urn:lsid:brc-central.org:pathema:">

    <!-- define an immuno-epitope -->
    <epi:EPITOPE rdf:about="urn:lsid:brc-central.org:epitope:boNT_A_Lc_L-peptide">
        <epi:ChemicalType>Peptide</epi:ChemicalType>
        <epi:ContinuousEpitope>Continuous</epi:ContinuousEpitope>
        <gff:Dbxref>PMID: 15115181</gff:Dbxref>
        <epi:ProteinName>BoNT/A Lc</epi:ProteinName>
        <epi:SourceStartingPosition>218</epi:SourceStartingPosition>
        <epi:EpitopeEndingPosition>231</epi:EpitopeEndingPosition>
        <epi:SourceSpecies>Clostridium botulinum</epi:SourceSpecies>
        <gff:Dbxref>iedb:7672</gff:Dbxref>
        <epi:SourceEndingPosition>231</epi:SourceEndingPosition>
        <rdfs:label>BoNT/A Lc - L-peptide</rdfs:label>
        <epi:ContinuousSequence>AVTLAHELIHAGHR</epi:ContinuousSequence>
        <epi:EpitopeName>L-peptide</epi:EpitopeName>
        <epi:EpitopeStartingPosition>218</epi:EpitopeStartingPosition>
    </epi:EPITOPE>

    <!-- state that a feature has that epitope -->
    <rdf:Description rdf:about="urn:lsid:brc-central.org:pathema:ntcb02.3.cds.00811">
        <brc:has_epitope rdf:resource="urn:lsid:brc-central.org:epitope:boNT_A_Lc_L-peptide" />
    </rdf:Description>
</rdf:RDF>